The detailed information of tRNA gene sequence


Sequence ID>WENV170017568
Genome IDBARU01001376
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 734
End posion on genome 641
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagatagtgt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGACTCGAAATCGAGTGTACTGCCAGAAGC
AGTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaatgtgat
Secondary structure (Cloverleaf model)
>WENV170017568	Ser	CGA
                   t      GCCA aaaatgtgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TGTACTGCCAGAAGCAGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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