The detailed information of tRNA gene sequence


Sequence ID>WENV170017608
Genome IDBARU01004147
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 143
End posion on genome 67
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttctgaaaat
tRNA gene sequence 
GCGCCTGTAGCTCAGGAGGATAGAGCAGCGGTTTCCTAAACCGCGGGTCGCGGGTTCAAG
TCCTGCCAGGCGCGCCA
Downstream region at tRNA end position 
gcaatttctt
Secondary structure (Cloverleaf model)
>WENV170017608	Arg	CCT
                   t      GCCA gcaatttctt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C G T C C     A
      G G A        A      | | + | |     A
    A       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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