The detailed information of tRNA gene sequence


Sequence ID>WENV170017622
Genome IDBARU01005155
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 227
End posion on genome 300
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatcgaacc
tRNA gene sequence 
GGGGTTGTAGCTCAGTTGGGAGAGCGCAGCGTTCGCAACGCTGAGGTCGAGGGTTCGAAT
CCCTTCAACTCCACgg
Downstream region at tRNA end position 
tcacgcagcg
Secondary structure (Cloverleaf model)
>WENV170017622	Ala	CGC
                   c      ACgg tcacgcagcg
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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