The detailed information of tRNA gene sequence


Sequence ID>WENV170017623
Genome IDBARU01005231
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 946
End posion on genome 870
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcccttggt
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGATAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttatcatccc
Secondary structure (Cloverleaf model)
>WENV170017623	Asp	GTC
                   t      GCCA ttatcatccc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      A T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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