The detailed information of tRNA gene sequence


Sequence ID>WENV170017624
Genome IDBARU01005365
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 672
End posion on genome 598
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgcccatct
tRNA gene sequence 
GGGAAATTGGTGTAGATGGTAGCATGACAGCCTCCAGAGCTGTAGACATGGGTTCGAAAC
CTATATTTCCCACTA
Downstream region at tRNA end position 
tgatgaaatt
Secondary structure (Cloverleaf model)
>WENV170017624	Trp	CCA
                   t      ACTA tgatgaaatt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A          A A
                    T     T A T C C     A
      A G A        G      | | + | |     G
    T       T G T G       A T G G G     C
    G       + | | +                 T T
    G       G C A T
      T A          G     AGAC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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