The detailed information of tRNA gene sequence


Sequence ID>WENV170017629
Genome IDBARU01006057
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 939
End posion on genome 865
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaattatc
tRNA gene sequence 
GGAGTCGTAGCATAATGGCAGTGTACTGGCCTGTCGAGCCAGGGAGTGCCGGTTCGAATC
CGGTCGGCTCCGCCA
Downstream region at tRNA end position 
aagaaaaata
Secondary structure (Cloverleaf model)
>WENV170017629	Asp	GTC
                   c      GCCA aagaaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     T G G C C     A
        A A        A      + | | | |     G
      T     T A C G       G C C G G     C
      G     + | | +                 T T
      G     G T G T
        C A        A     GGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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