The detailed information of tRNA gene sequence


Sequence ID>WENV170017648
Genome IDBARU01008295
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 462
End posion on genome 538
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aacgaagtac
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTTAGAGCACCGGACTCCAAATCCGGGTGATGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aaagtcagtt
Secondary structure (Cloverleaf model)
>WENV170017648	Trp	CCA
                   c      GCCA aaagtcagtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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