The detailed information of tRNA gene sequence


Sequence ID>WENV170017652
Genome IDBARU01008864
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 306
End posion on genome 212
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatggaaaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCCCGGCTGAAAGCGCTCGACTCGAAATCGAGTAGGCGGGTAGTCC
CTGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatcaatg
Secondary structure (Cloverleaf model)
>WENV170017652	Ser	CGA
                   a      GCCA aaaatcaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G C G G G     C
  G           | | |                 T T
  G         A A G C
    C T G A        G     TAGGCGGGTAGTCCCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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