The detailed information of tRNA gene sequence


Sequence ID>WENV170017668
Genome IDBARU01010375
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 410
End posion on genome 320
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaagccctaa
tRNA gene sequence 
GGAGGGGTGTCCGAATTGGCAAGGAGCCGGTCTTGAAAACCGGTGAAAGGCAGCAATGCC
CGTCTGGGTTCGAGTCCCAGCCCCTCCGCCA
Downstream region at tRNA end position 
gttttgatga
Secondary structure (Cloverleaf model)
>WENV170017668	Ser	TGA
                   a      GCCA gttttgatga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGCAGCAATGCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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