The detailed information of tRNA gene sequence


Sequence ID>WENV170017681
Genome IDBARU01012175
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 745
End posion on genome 654
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGTGCTTACCCTGAGAAATCGG
GGTCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
aatgaagtga
Secondary structure (Cloverleaf model)
>WENV170017681	Ser	GCT
                   t      GCCA aatgaagtga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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