The detailed information of tRNA gene sequence


Sequence ID>WENV170017684
Genome IDBARU01012229
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 465
End posion on genome 393
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggacgcatT
tRNA gene sequence 
GGAGTATTAGTTTAGTGGAAGAATTCGCAGTTTGGGGCTGCAGGGCGGGTGTTCGATTCA
TCCATACTCCATag
Downstream region at tRNA end position 
acctgtagtt
Secondary structure (Cloverleaf model)
>WENV170017684	Pro	TGG
                   T      ATag acctgtagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     T - A          T T
                    T     C C T A C     A
        G A        A      | | + | |     G
      T     T T T G       G G G T G     C
      G     + | | +                 T T
      G     G A A T
        A A        T     GGGC
                    C   A
                    G - C
                    C - G
                    A - T
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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