The detailed information of tRNA gene sequence


Sequence ID>WENV170017694
Genome IDBARU01013442
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 424
End posion on genome 513
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgttataacc
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGCCGAAAGCGGCGGTCTTGAAAACCGTTAGGGCCTTACGGCCC
TCGGGGGTTCGAATCCTCTCCCCTCCGCCA
Downstream region at tRNA end position 
aatttttgct
Secondary structure (Cloverleaf model)
>WENV170017694	Ser	TGA
                   c      GCCA aatttttgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | + | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TAGGGCCTTACGGCCCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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