The detailed information of tRNA gene sequence


Sequence ID>WENV170017699
Genome IDBARU01014064
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 88
End posion on genome 163
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ctcacaatat
tRNA gene sequence 
GGGTGCGTAGCTAAATAGGTTTAGCAACAAGCTCTTAACTTGTAGCATGGAGGTTCGAAT
CCTCTCGCACTCACAA
Downstream region at tRNA end position 
tgcctttgta
Secondary structure (Cloverleaf model)
>WENV170017699	Lys	CTT
                   t      ACAA tgcctttgta
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T A A        A      + | | | |     G
    A       A T C G       G G A G G     C
    G       | | | |                 T T
    G       T A G C
      T T          A     AGCAT
                    A - T
                    C - G
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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