The detailed information of tRNA gene sequence


Sequence ID>WENV170017703
Genome IDBARU01014269
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 123
End posion on genome 197
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaataaaagt
tRNA gene sequence 
GGGGATGTAGCTCAGTGGAAGAGCGCTTCTCTGGCAGGGAAGAGGTCGTGGGTTCAAGTC
CCATCATCTCCACCA
Downstream region at tRNA end position 
ctatttttta
Secondary structure (Cloverleaf model)
>WENV170017703	Ala	GGC
                   t      ACCA ctatttttta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T A C C C     A
        G A        A      + | | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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