The detailed information of tRNA gene sequence


Sequence ID>WENV170017708
Genome IDBARU01015034
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 130
End posion on genome 54
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgttacaacc
tRNA gene sequence 
GGGGCATTAGCTCAGTAGGCTAGAGCGTCTGACTGGCAGTCAGAAGGTCAGCGGTTCGAC
TCCGCTATGCTCCACCT
Downstream region at tRNA end position 
tcgccctacg
Secondary structure (Cloverleaf model)
>WENV170017708	Ala	GGC
                   c      ACCT tcgccctacg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    A       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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