The detailed information of tRNA gene sequence


Sequence ID>WENV170017710
Genome IDBARU01016673
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 547
End posion on genome 473
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaataaaagt
tRNA gene sequence 
GGGGATGTAGCTCAGTGGAAGAGCGCTTCTCTGGCAGGGAAGAGGTCGTGGGTTCAAGTC
CCATCATCTCCACCA
Downstream region at tRNA end position 
ctatttttta
Secondary structure (Cloverleaf model)
>WENV170017710	Ala	GGC
                   t      ACCA ctatttttta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T A C C C     A
        G A        A      + | | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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