The detailed information of tRNA gene sequence


Sequence ID>WENV170017732
Genome IDBARU01018607
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 484
End posion on genome 408
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacatatagc
tRNA gene sequence 
CGCGGGGTAGAGCAGTTGGTCAGCTCGGGTGGTTCATAACCACCAGGTCGTGGGTTCGAA
TCCCACCCCCGCCACCA
Downstream region at tRNA end position 
gtattcctcg
Secondary structure (Cloverleaf model)
>WENV170017732	Met	CAT
                   c      ACCA gtattcctcg
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C G A G       G T G G G     C
    G       | | | |                 T T
    G       G C T C
      T C A        G     AGGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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