The detailed information of tRNA gene sequence


Sequence ID>WENV170017740
Genome IDBARU01019204
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 84
End posion on genome 160
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggaaaaat
tRNA gene sequence 
AGGTCCGTAGCTCAACTGGCTAGAGCACCGGACTCCAAATCCGGCGGTTGCGGGTTCGAG
TCCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
acgttacagt
Secondary structure (Cloverleaf model)
>WENV170017740	Trp	CCA
                   t      GCCA acgttacagt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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