The detailed information of tRNA gene sequence


Sequence ID>WENV170017745
Genome IDBARU01019579
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 324
End posion on genome 236
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggaaaaaC
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTTTAATGCGCCGCATTCGAAATGCGGTTTGGGAGAAATCCCT
TCACAGGTTCGAATCCTGTACCCTCCGTtt
Downstream region at tRNA end position 
tcttgcgggg
Secondary structure (Cloverleaf model)
>WENV170017745	Ser	CGA
                   C      GTtt tcttgcgggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G A C G       A C A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TTTGGGAGAAATCCCTTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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