The detailed information of tRNA gene sequence


Sequence ID>WENV170017760
Genome IDBARU01022277
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 7
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnccaaaaT
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCACACGGCTCATACCCGTGGAGTCCGGGGTTCGAA
TCCCTGCACCGCTACCC
Downstream region at tRNA end position 
tacctctaaa
Secondary structure (Cloverleaf model)
>WENV170017760	Met	CAT
                   T      ACCC tacctctaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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