The detailed information of tRNA gene sequence


Sequence ID>WENV170017763
Genome IDBARU01022786
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 450
End posion on genome 359
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaattgcg
tRNA gene sequence 
GGAGAGGTGACTGAGTGGTTGAAAGTGCACGATTGGAAATCGTGTAGGGGGTTAAAGCCT
CCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170017763	Ser	GGA
                   g      GCCA gtgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      T G A        G     TAGGGGGTTAAAGCCTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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