The detailed information of tRNA gene sequence


Sequence ID>WENV170017770
Genome IDBARU01023946
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 655
End posion on genome 579
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagctccacc
tRNA gene sequence 
GGAGTCGTAGCTCAATTAGGCAGAGCACTGGCCTGTCTAGCCAGGGGTTGCGGGTTCAAG
GCCCGTCGACTTCGCCA
Downstream region at tRNA end position 
atggagaaat
Secondary structure (Cloverleaf model)
>WENV170017770	Asp	GTC
                   c      GCCA atggagaaat
                     G - C
                     G + T
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          G G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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