The detailed information of tRNA gene sequence


Sequence ID>WENV170017771
Genome IDBARU01023946
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 576
End posion on genome 489
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttcgccaat
tRNA gene sequence 
GGAGAAATGGCAGAGTGGCTTATAGCAATCGTCTGCTAAGCGATTAGACTGAAAGGTCTC
GTTGGTTCGAATCCAACTTTCTTCGCCA
Downstream region at tRNA end position 
aacaagaaag
Secondary structure (Cloverleaf model)
>WENV170017771	Ser	GCT
                   t      GCCA aacaagaaag
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C A A C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T T G G     C
    G       +   | |                 T T
    C       T A G C
      T T A        A     TAGACTGAAAGGTCTC
                    A - T
                    T - A
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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