The detailed information of tRNA gene sequence


Sequence ID>WENV170017796
Genome IDBARU01026341
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 562
End posion on genome 637
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agcacattgt
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGGAGAACGCTTGAATGGCATTCAAGAGGTCACGGGTTCGAGT
CCCGTCAGCTCCACCA
Downstream region at tRNA end position 
tcctgacgga
Secondary structure (Cloverleaf model)
>WENV170017796	Ala	GGC
                   t      ACCA tcctgacgga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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