The detailed information of tRNA gene sequence


Sequence ID>WENV170017805
Genome IDBARU01027977
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 415
End posion on genome 505
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagagataga
tRNA gene sequence 
GGAGAGGTGACCGAGCGGTTGAAGGTGCACGCCTGGAAAGCGTGTGTGCTGTGTGAAACA
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position 
aaaaacggga
Secondary structure (Cloverleaf model)
>WENV170017805	Ser	GGA
                   a      GCtt aaaaacggga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTGCTGTGTGAAACAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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