The detailed information of tRNA gene sequence


Sequence ID>WENV170017810
Genome IDBARU01028851
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 220
End posion on genome 294
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctgttgggt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGGAGAGCAACGGTCTCCAAAACCGTCGGTCGGGGGTTCGAA
TCCTCCCACTCCTGCtt
Downstream region at tRNA end position 
tgttttcctg
Secondary structure (Cloverleaf model)
>WENV170017810	Trp	CCA
                   t      GCtt tgttttcctg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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