The detailed information of tRNA gene sequence


Sequence ID>WENV170017827
Genome IDBARU01030152
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 254
End posion on genome 178
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaaagagag
tRNA gene sequence 
AGGTGAGTAGCTCAACTGGTTAGAGCGTCGGTCTCCAAAACCGAAGGTTGCGGGTTCGAG
TCCTGCCTCACCTGCCC
Downstream region at tRNA end position 
ataataatac
Secondary structure (Cloverleaf model)
>WENV170017827	Trp	CCA
                   g      GCCC ataataatac
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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