The detailed information of tRNA gene sequence


Sequence ID>WENV170017828
Genome IDBARU01030172
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 668
End posion on genome 594
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccttttccg
tRNA gene sequence 
GGGCGGTTAGCTCAGCCGGTTAGAGCGCTGCGTTCACATCGCAGAGGTCATCCGTTCGAA
TCGGATACCGCCCACgt
Downstream region at tRNA end position 
gacgctgtgg
Secondary structure (Cloverleaf model)
>WENV170017828	Val	CAC
                   g      ACgt gacgctgtgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T A G G C     A
      C G A        A      | | | | |     G
    C       C T C G       A T C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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