The detailed information of tRNA gene sequence


Sequence ID>WENV170017829
Genome IDBARU01030179
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 359
End posion on genome 441
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccaagtaatt
tRNA gene sequence 
GCCAGGATAGCCAAGCGGTACGGCGGGGGTCTCGAAAACCTCTGGCATTAGCCTCCGGGG
TTCAAATCCCCGTCCTGGCTCCA
Downstream region at tRNA end position 
ttattagaaa
Secondary structure (Cloverleaf model)
>WENV170017829	Ser	CGA
                   t      TCCA ttattagaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      C     A C C G       C G G G G     C
      G       | | |                 T T
      G     C G G C
        T A        G     TGGCATTAGCCTC
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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