The detailed information of tRNA gene sequence


Sequence ID>WENV170017831
Genome IDBARU01030457
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 284
End posion on genome 194
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatcttgtcc
tRNA gene sequence 
GGAGAGGTGGGAGAGTGGCTTAATCCACCAGTTTGCTAAACTGGCGTACTCTATTCGGGT
ACCGGGGGTTCAAATCCCCCCCTCTCCGCAA
Downstream region at tRNA end position 
aacctaaatc
Secondary structure (Cloverleaf model)
>WENV170017831	Ser	GCT
                   c      GCAA aacctaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    G       G A G G       G G G G G     C
    G         | | |                 T T
    C       A T C C
      T T A        A     CGTACTCTATTCGGGTACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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