The detailed information of tRNA gene sequence


Sequence ID>WENV170017833
Genome IDBARU01030544
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 549
End posion on genome 474
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctaagttgct
tRNA gene sequence 
GGGCTCATAGCTCAGGTGGTAGAGCGTACCCCTGATAAGGGTAAGGTCCCTGGTTCAAGT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
tggggatgta
Secondary structure (Cloverleaf model)
>WENV170017833	Ile	GAT
                   t      ACCA tggggatgta
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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