The detailed information of tRNA gene sequence


Sequence ID>WENV170017842
Genome IDBARU01031993
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 169
End posion on genome 93
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttaaaaac
tRNA gene sequence 
GGTGGCGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGTCACCGCCA
Downstream region at tRNA end position 
ctgagttttt
Secondary structure (Cloverleaf model)
>WENV170017842	Asp	GTC
                   c      GCCA ctgagttttt
                     G - C
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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