The detailed information of tRNA gene sequence


Sequence ID>WENV170017852
Genome IDBARU01032626
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 279
End posion on genome 203
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccacccgagg
tRNA gene sequence 
GGCGGCGTAGCCAAGAGGACCAAGGCAACGGTTTGCAAAACCGTCATTCACGGGTTCGAA
TCCCGTCGCCGCCTCCA
Downstream region at tRNA end position 
gtgcctttcc
Secondary structure (Cloverleaf model)
>WENV170017852	Cys	GCA
                   g      TCCA gtgcctttcc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      A G A        A      | | | | |     G
    G       A C C G       A C G G G     C
    G         | | |                 T T
    A       A G G C
      C C A        A     CATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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