The detailed information of tRNA gene sequence


Sequence ID>WENV170017878
Genome IDBARU01036175
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 129
End posion on genome 201
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaattggccc
tRNA gene sequence 
GGGGACGTAGCTCAACTGGGAGAGCGCCGGCTTTGCAAGCCGGAGGTTGTCGGTTCGAGC
CCGATCGTCTCCAgtt
Downstream region at tRNA end position 
tcgctctttg
Secondary structure (Cloverleaf model)
>WENV170017878	Ala	TGC
                   c      Agtt tcgctctttg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T A G C C     A
      C A A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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