The detailed information of tRNA gene sequence


Sequence ID>WENV170017879
Genome IDBARU01036182
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 234
End posion on genome 310
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcctgatac
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAA
TCCAACCCCCGCTACCA
Downstream region at tRNA end position 
tcttattatt
Secondary structure (Cloverleaf model)
>WENV170017879	Met	CAT
                   c      ACCA tcttattatt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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