The detailed information of tRNA gene sequence


Sequence ID>WENV170017892
Genome IDBARU01039331
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 453
End posion on genome 543
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atacagaagt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCGGTTATGCCGT
ACCATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
ccatttatat
Secondary structure (Cloverleaf model)
>WENV170017892	Ser	GGA
                   t      GCCA ccatttatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTGCGGTTATGCCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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