The detailed information of tRNA gene sequence


Sequence ID>WENV170017893
Genome IDBARU01039443
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 619
End posion on genome 543
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaaaaactg
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTTAGAGCACTATCCTGATAAGATAGGGGTCGTTGGTTCGAG
TCCAACCGAGCCCACCA
Downstream region at tRNA end position 
aaagggagga
Secondary structure (Cloverleaf model)
>WENV170017893	Ile	GAT
                   g      ACCA aaagggagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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