The detailed information of tRNA gene sequence


Sequence ID>WENV170017897
Genome IDBARU01040067
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 364
End posion on genome 272
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcgcgattC
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGCTGAATGCACCGGTTTGCTAAACCGGCGTGCGCGTGAACGCG
TGTACCGCGGGTTCGAATCCCGCCCTCTCCGTtg
Downstream region at tRNA end position 
gtgagttgag
Secondary structure (Cloverleaf model)
>WENV170017897	Ser	GCT
                   C      GTtg gtgagttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CGTGCGCGTGAACGCGTGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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