The detailed information of tRNA gene sequence


Sequence ID>WENV170017901
Genome IDBARU01040990
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 621
End posion on genome 546
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgcttgggt
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGGCTGGTTCGCAATCAGCAGGTCAGGGGTTCAAAT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tccgccgtcg
Secondary structure (Cloverleaf model)
>WENV170017901	Ala	CGC
                   t      ACCA tccgccgtcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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