The detailed information of tRNA gene sequence


Sequence ID>WENV170017905
Genome IDBARU01041904
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 261
End posion on genome 186
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caccaaaaat
tRNA gene sequence 
GCTGGCATAGCTCAATCGGTAGAGCAGGGGTTTTGTAAACCCCAGGTTAGAGGTTCGATT
CCTCTTGTCAGCTCCA
Downstream region at tRNA end position 
ccggagtcgt
Secondary structure (Cloverleaf model)
>WENV170017905	Thr	TGT
                   t      TCCA ccggagtcgt
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T
                     C - G
                     A - T          T T
                    T     T C T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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