The detailed information of tRNA gene sequence


Sequence ID>WENV170017908
Genome IDBARU01042265
Search identical group
Phylum/Class[BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 473
End posion on genome 548
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aagaatttgt
tRNA gene sequence 
GGGGATGTAGCTCAGCGGGTAGAACACTTGCCTCGCATGCAAGAGGCCGGGGGTTCGAAT
CCCCCCATCTCCACCA
Downstream region at tRNA end position 
accttagttt
Secondary structure (Cloverleaf model)
>WENV170017908	Ala	CGC
                   t      ACCA accttagttt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    G       C T C G       G G G G G     C
    G       | |   |                 T T
    G       G A A C
      T A          A     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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