The detailed information of tRNA gene sequence


Sequence ID>WENV170017923
Genome IDBARV01000093
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 2101
End posion on genome 2179
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tattaattat
tRNA gene sequence 
CGGGATGTAGCGCAGTTTGGTTTAGCGCGCAGCGTTCGGGACGCTGAGGTCCGGGGTTCA
AATCCCCGCATCCCGACCA
Downstream region at tRNA end position 
tatttcaaaa
Secondary structure (Cloverleaf model)
>WENV170017923	Pro	CGG
                   t      ACCA tatttcaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G C C C C     A
    T T G A        A      | | | | |     A
  T         C G C G       C G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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