The detailed information of tRNA gene sequence


Sequence ID>WENV170017924
Genome IDBARV01000139
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 774
End posion on genome 862
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgtcgcctt
tRNA gene sequence 
GCCGGGGTGTCCCAACCTGGTACGGAGCAGGGTTGCTAACCCTGTGACGCGTAAGCGTCT
TGTGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
ttactttcgg
Secondary structure (Cloverleaf model)
>WENV170017924	Ser	GCT
                   t      GCCA ttactttcgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C A A        G      | + | | |     A
    C       C C C T       G T G G G     C
    T         | | |                 T T
    G       C G G A
      G T A        G     TGACGCGTAAGCGTCTT
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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