The detailed information of tRNA gene sequence


Sequence ID>WENV170017925
Genome IDBARV01000177
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 2088
End posion on genome 1995
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgctgaatat
tRNA gene sequence 
GGAGAGGTGCTTGAGTGGTCGAAAAGGGCCGCCTGCTAAGCGGTTAGGCGGGTGTAAGCC
TGTCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaagataat
Secondary structure (Cloverleaf model)
>WENV170017925	Ser	GCT
                   t      GCCA tgaagataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T T C       G A G G G     C
    G         | | |                 T T
    T       A A A G
      C G A        G     TAGGCGGGTGTAAGCCTGTCTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK