The detailed information of tRNA gene sequence


Sequence ID>WENV170017933
Genome IDBARV01000446
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 883
End posion on genome 972
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctatatcct
tRNA gene sequence 
GGAGGGGTGACCGAGTGGTTTATGGTGGCGGTCTTGAAAACCGTTTTCGCTTCTAAGCGA
ACGTGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
gagcaaagaa
Secondary structure (Cloverleaf model)
>WENV170017933	Ser	TGA
                   t      GCCA gagcaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    T       T G G T
      T T A        G     TTTCGCTTCTAAGCGAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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