The detailed information of tRNA gene sequence


Sequence ID>WENV170017949
Genome IDBARV01000952
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 904
End posion on genome 831
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattaaataa
tRNA gene sequence 
GGCGGCATCGCCAAGTGGGAAGGCAGAGGACTGCAAATCCTTCATCCTCGGTTCGAATCC
GAGTGCCGCCTCCA
Downstream region at tRNA end position 
tttagttttg
Secondary structure (Cloverleaf model)
>WENV170017949	Cys	GCA
                   a      TCCA tttagttttg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A G C C     A
        G A        C      | | | | |     G
      T     A C C G       C T C G G     C
      G       | | |                 T T
      G     A G G C
        G A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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