The detailed information of tRNA gene sequence


Sequence ID>WENV170017950
Genome IDBARV01000952
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 788
End posion on genome 714
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gctaggtaat
tRNA gene sequence 
GGGCGGTTAGTTCAGAGGAAGAATGCTTGCTTGACGCGCAAGAGGTCACTGGTTCGAGTC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
ttttaaaaaa
Secondary structure (Cloverleaf model)
>WENV170017950	Val	GAC
                   t      ACCA ttttaaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
        G A        A      | | | | |     G
      A     C T T G       A C T G G     C
      G     | | | +                 T T
      G     G A A T
        A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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