The detailed information of tRNA gene sequence


Sequence ID>WENV170017962
Genome IDBARV01001425
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1242
End posion on genome 1157
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tttttgcttt
tRNA gene sequence 
GCCGAGGTGGCGGAATGGCAGACGCGGCGGACTTAAAATCCGTTTCCCGAAGGGGAGTGT
GGGTTCGAGTCCCTCCCTCGGCACCA
Downstream region at tRNA end position 
ccctgtgtcg
Secondary structure (Cloverleaf model)
>WENV170017962	Leu	TAA
                   t      ACCA ccctgtgtcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TTCCCGAAGGGGAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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