The detailed information of tRNA gene sequence


Sequence ID>WENV170017965
Genome IDBARV01001583
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1193
End posion on genome 1101
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acatattttt
tRNA gene sequence 
GGAGGAGTGCTTGAGTGGACGAAAAGGATGGTTTGCTAAACCATTAAGGGGTTAATATCT
CCTTCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ttttttaacc
Secondary structure (Cloverleaf model)
>WENV170017965	Ser	GCT
                   t      GCCA ttttttaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T T C       G T G G G     C
    G         | | |                 T T
    A       A A A G
      C G A        G     TAAGGGGTTAATATCTCCTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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