The detailed information of tRNA gene sequence


Sequence ID>WENV170017971
Genome IDBARV01001877
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 111
End posion on genome 184
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaagaattag
tRNA gene sequence 
GCGCCCGTAGCTCAGCCGGAAAGAGCAACGGATTTCTAATCCGTAGGTCAGGGGTTCGAA
TCCCTTCGGGCGTGttt
Downstream region at tRNA end position 
tttcgaaccc
Secondary structure (Cloverleaf model)
>WENV170017971	Arg	TCT
                   g      Gttt tttcgaaccc
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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